Code for Quiz 6, more dplyr and our first interactive chart using echarts4r.
2.Read the data in the files, drug_cos.csv
, health_cos.csv
in to R and assign to the variables drug_cos
and health_cos
, respectively
drug_cos <- read_csv("https://estanny.com/static/week6/drug_cos.csv")
health_cos <- read_csv("https://estanny.com/static/week6/health_cos.csv")
drug_cos %>% glimpse()
Rows: 104
Columns: 9
$ ticker <chr> "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS…
$ name <chr> "Zoetis Inc", "Zoetis Inc", "Zoetis Inc", "Zoe…
$ location <chr> "New Jersey; U.S.A", "New Jersey; U.S.A", "New…
$ ebitdamargin <dbl> 0.149, 0.217, 0.222, 0.238, 0.182, 0.335, 0.36…
$ grossmargin <dbl> 0.610, 0.640, 0.634, 0.641, 0.635, 0.659, 0.66…
$ netmargin <dbl> 0.058, 0.101, 0.111, 0.122, 0.071, 0.168, 0.16…
$ ros <dbl> 0.101, 0.171, 0.176, 0.195, 0.140, 0.286, 0.32…
$ roe <dbl> 0.069, 0.113, 0.612, 0.465, 0.285, 0.587, 0.48…
$ year <dbl> 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018…
health_cos %>% glimpse()
Rows: 464
Columns: 11
$ ticker <chr> "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS"…
$ name <chr> "Zoetis Inc", "Zoetis Inc", "Zoetis Inc", "Zoet…
$ revenue <dbl> 4233000000, 4336000000, 4561000000, 4785000000,…
$ gp <dbl> 2581000000, 2773000000, 2892000000, 3068000000,…
$ rnd <dbl> 427000000, 409000000, 399000000, 396000000, 364…
$ netincome <dbl> 245000000, 436000000, 504000000, 583000000, 339…
$ assets <dbl> 5711000000, 6262000000, 6558000000, 6588000000,…
$ liabilities <dbl> 1975000000, 2221000000, 5596000000, 5251000000,…
$ marketcap <dbl> NA, NA, 16345223371, 21572007994, 23860348635, …
$ year <dbl> 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018,…
$ industry <chr> "Drug Manufacturers - Specialty & Generic", "Dr…
names_drug <- drug_cos %>% names()
names_health <- health_cos %>% names()
intersect(names_drug, names_health)
[1] "ticker" "name" "year"
5.Select subset of variables to work with
-For drug_cos
select (in this order): ticker
, year
, grossmargin
-Extract observations for 2018
-Assign output to drug_subset
-For health_cos
select (in this order): ticker
, year
, revenue
, gp
, industry
-Extract observations for 2018
-Assign output to health_subset
drug_subset
join with columns in health_subset
drug_subset %>% left_join(health_subset)
# A tibble: 13 x 6
ticker year grossmargin revenue gp industry
<chr> <dbl> <dbl> <dbl> <dbl> <chr>
1 ZTS 2018 0.672 5.82e 9 3.91e 9 Drug Manufacturers - …
2 PRGO 2018 0.387 4.73e 9 1.83e 9 Drug Manufacturers - …
3 PFE 2018 0.79 5.36e10 4.24e10 Drug Manufacturers - …
4 MYL 2018 0.35 1.14e10 4.00e 9 Drug Manufacturers - …
5 MRK 2018 0.681 4.23e10 2.88e10 Drug Manufacturers - …
6 LLY 2018 0.738 2.46e10 1.81e10 Drug Manufacturers - …
7 JNJ 2018 0.668 8.16e10 5.45e10 Drug Manufacturers - …
8 GILD 2018 0.781 2.21e10 1.73e10 Drug Manufacturers - …
9 BMY 2018 0.71 2.26e10 1.60e10 Drug Manufacturers - …
10 BIIB 2018 0.865 1.35e10 1.16e10 Drug Manufacturers - …
11 AMGN 2018 0.827 2.37e10 1.96e10 Drug Manufacturers - …
12 AGN 2018 0.861 1.58e10 1.36e10 Drug Manufacturers - …
13 ABBV 2018 0.764 3.28e10 2.50e10 Drug Manufacturers - …
drug_cos
Extract observations for the ticker JNJ from drug_cos
Assign output to the variable drug_cos_subset
drug_cos_subset <- drug_cos %>%
filter(ticker == "JNJ")
-Display drug_cos_subset
drug_cos_subset
# A tibble: 8 x 9
ticker name location ebitdamargin grossmargin netmargin ros roe
<chr> <chr> <chr> <dbl> <dbl> <dbl> <dbl> <dbl>
1 JNJ John… New Jer… 0.247 0.687 0.149 0.199 0.161
2 JNJ John… New Jer… 0.272 0.678 0.161 0.218 0.173
3 JNJ John… New Jer… 0.281 0.687 0.194 0.224 0.197
4 JNJ John… New Jer… 0.336 0.694 0.22 0.284 0.217
5 JNJ John… New Jer… 0.335 0.693 0.22 0.282 0.219
6 JNJ John… New Jer… 0.338 0.697 0.23 0.286 0.229
7 JNJ John… New Jer… 0.317 0.667 0.017 0.243 0.019
8 JNJ John… New Jer… 0.318 0.668 0.188 0.233 0.244
# … with 1 more variable: year <dbl>
-Use left_join to combine the rows and columns of drug_cos_subset
with the columns of health_cos
-Assign the output to combo_df
combo_df <- drug_cos_subset %>%
left_join(health_cos)
combo_df
combo_df
# A tibble: 8 x 17
ticker name location ebitdamargin grossmargin netmargin ros roe
<chr> <chr> <chr> <dbl> <dbl> <dbl> <dbl> <dbl>
1 JNJ John… New Jer… 0.247 0.687 0.149 0.199 0.161
2 JNJ John… New Jer… 0.272 0.678 0.161 0.218 0.173
3 JNJ John… New Jer… 0.281 0.687 0.194 0.224 0.197
4 JNJ John… New Jer… 0.336 0.694 0.22 0.284 0.217
5 JNJ John… New Jer… 0.335 0.693 0.22 0.282 0.219
6 JNJ John… New Jer… 0.338 0.697 0.23 0.286 0.229
7 JNJ John… New Jer… 0.317 0.667 0.017 0.243 0.019
8 JNJ John… New Jer… 0.318 0.668 0.188 0.233 0.244
# … with 9 more variables: year <dbl>, revenue <dbl>, gp <dbl>,
# rnd <dbl>, netincome <dbl>, assets <dbl>, liabilities <dbl>,
# marketcap <dbl>, industry <chr>
-Note: the variables ticker, name, location and industry are the same for all the observations
-Assign the company name to co_name
co_name<- combo_df %>%
distinct(name) %>%
pull()
-Assign the company location to co_location
co_location <- combo_df %>%
distinct(location) %>%
pull()
co_industry
group
co_industry <- combo_df %>%
distinct(industry) %>%
pull()
Put the r inline commands used in the blanks below. When you knit the document the results of the commands will be displayed in your text.
The company Johnson & Johnson is located in New Jersey;U.S.A and is a member of the Drug Manufacturers industry group.
-Start with combo_df
-Select variables (in this order): year
, grossmargin
, netmargin
, revenue
, gp
, netincome
-Assign the output to combo_df_subset
combo_df_subset <- combo_df %>%
select(year, grossmargin, netmargin,
revenue, gp, netincome)
combo_df_subset
combo_df_subset
# A tibble: 8 x 6
year grossmargin netmargin revenue gp netincome
<dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 2011 0.687 0.149 65030000000 44670000000 9672000000
2 2012 0.678 0.161 67224000000 45566000000 10853000000
3 2013 0.687 0.194 71312000000 48970000000 13831000000
4 2014 0.694 0.22 74331000000 51585000000 16323000000
5 2015 0.693 0.22 70074000000 48538000000 15409000000
6 2016 0.697 0.23 71890000000 50101000000 16540000000
7 2017 0.667 0.017 76450000000 51011000000 1300000000
8 2018 0.668 0.188 81581000000 54490000000 15297000000
-Create the variable grossmargin_check
to compare with the variable grossmargin
. They should be equal. -grossmargin_check
= gp
/ revenue
-Create the variable close_enough
to check that the absolute value of the difference between grossmargin_check
and grossmargin
is less than 0.001
combo_df_subset %>%
mutate(grossmargin_check = gp/revenue,
close_enough = abs(grossmargin_check - grossmargin) < 0.001)
# A tibble: 8 x 8
year grossmargin netmargin revenue gp netincome
<dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 2011 0.687 0.149 6.50e10 4.47e10 9.67e 9
2 2012 0.678 0.161 6.72e10 4.56e10 1.09e10
3 2013 0.687 0.194 7.13e10 4.90e10 1.38e10
4 2014 0.694 0.22 7.43e10 5.16e10 1.63e10
5 2015 0.693 0.22 7.01e10 4.85e10 1.54e10
6 2016 0.697 0.23 7.19e10 5.01e10 1.65e10
7 2017 0.667 0.017 7.64e10 5.10e10 1.30e 9
8 2018 0.668 0.188 8.16e10 5.45e10 1.53e10
# … with 2 more variables: grossmargin_check <dbl>,
# close_enough <lgl>
-Create the variable netmargin_check
to compare with the variable netmargin
. They should be equal.
-Create the variable close_enough
to check that the absolute value of the difference between netmargin_check
and netmargin
is less than 0.001
combo_df_subset %>%
mutate(netmargin_check = netincome / revenue,
close_enough = abs(netmargin_check - netmargin) < 0.001)
# A tibble: 8 x 8
year grossmargin netmargin revenue gp netincome
<dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 2011 0.687 0.149 6.50e10 4.47e10 9.67e 9
2 2012 0.678 0.161 6.72e10 4.56e10 1.09e10
3 2013 0.687 0.194 7.13e10 4.90e10 1.38e10
4 2014 0.694 0.22 7.43e10 5.16e10 1.63e10
5 2015 0.693 0.22 7.01e10 4.85e10 1.54e10
6 2016 0.697 0.23 7.19e10 5.01e10 1.65e10
7 2017 0.667 0.017 7.64e10 5.10e10 1.30e 9
8 2018 0.668 0.188 8.16e10 5.45e10 1.53e10
# … with 2 more variables: netmargin_check <dbl>, close_enough <lgl>
-Fill in the blanks
-Put the command you use in the Rchunks in the Rmd file for this quiz
-Use the health_cos data
-For each industry calculate
mean_netmargin_percent = mean(netincome / revenue) * 100 median_netmargin_percent = median(netincome / revenue) * 100 min_netmargin_percent = min(netincome / revenue) * 100 max_netmargin_percent = max(netincome / revenue) * 100
health_cos %>%
group_by(industry) %>%
summarize(mean_netmargin_percent = mean(netincome / revenue) * 100,
median_netmargin_percent = median(netincome / revenue) * 100,
min_netmargin_percent = min(netincome / revenue) * 100,
max_netmargin_percent = max(netincome / revenue) * 100)
# A tibble: 9 x 5
industry mean_netmargin_… median_netmargi… min_netmargin_p…
* <chr> <dbl> <dbl> <dbl>
1 Biotech… -4.66 7.62 -197.
2 Diagnos… 13.1 12.3 0.399
3 Drug Ma… 19.4 19.5 -34.9
4 Drug Ma… 5.88 9.01 -76.0
5 Healthc… 3.28 3.37 -0.305
6 Medical… 6.10 6.46 1.40
7 Medical… 12.4 14.3 -56.1
8 Medical… 1.70 1.03 -0.102
9 Medical… 12.3 14.0 -47.1
# … with 1 more variable: max_netmargin_percent <dbl>
-mean_netmargin_percent for the industry Diagnostics & Research is 13.1% -median_netmargin_percent for the industry Diagnostics & Research is 12.3% -min_netmargin_percent for the industry Diagnostics & Research is 0.399% -max_netmargin_percent for the industry** Diagnostics & Research** is 26.3%
-Fill in the blanks
-Use the health_cos
data
-Extract observations for the ticker ZTS from health_cos
and assign to the variable health_cos_subset
health_cos_subset <- health_cos %>%
filter(ticker == "ZTS")
health_cos_subset
# A tibble: 8 x 11
ticker name revenue gp rnd netincome assets liabilities
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 ZTS Zoet… 4.23e9 2.58e9 4.27e8 2.45e8 5.71e 9 1975000000
2 ZTS Zoet… 4.34e9 2.77e9 4.09e8 4.36e8 6.26e 9 2221000000
3 ZTS Zoet… 4.56e9 2.89e9 3.99e8 5.04e8 6.56e 9 5596000000
4 ZTS Zoet… 4.78e9 3.07e9 3.96e8 5.83e8 6.59e 9 5251000000
5 ZTS Zoet… 4.76e9 3.03e9 3.64e8 3.39e8 7.91e 9 6822000000
6 ZTS Zoet… 4.89e9 3.22e9 3.76e8 8.21e8 7.65e 9 6150000000
7 ZTS Zoet… 5.31e9 3.53e9 3.82e8 8.64e8 8.59e 9 6800000000
8 ZTS Zoet… 5.82e9 3.91e9 4.32e8 1.43e9 1.08e10 8592000000
# … with 3 more variables: marketcap <dbl>, year <dbl>,
# industry <chr>
-In the console, type ?distinct
. Go to the help pane to see what distinct
does -In the console, type ?pull
. Go to the help pane to see what pull
does
Run the code below
health_cos_subset %>%
distinct(name) %>%
pull(name)
[1] "Zoetis Inc"
co_name
co_name <- health_cos_subset %>%
distinct(name) %>%
pull(name)
You can take output from your code and include it in your text.
-The name of the company with ticker ZTS is Zoetis Inc In following chuck
-Assign the company’s industry group to the variableco_industry
co_industry <- health_cos_subset %>%
select(industry) %>%
pull()
This is outside the R chunk. Put the r inline commands used in the blanks below. When you knit the document the results of the commands will be displayed in your text.
The company Zoetis Inc is a member of the Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic, Drug Manufacturers - Specialty & Generic group.
7.Prepare the data for the plots
-start with health_cos THEN -group_by industry THEN -calculate the median research and development expenditure as a percent of revenue by industry -assign the output to df
glimpse
to glimpse the data for the plots
df %>% glimpse()
Rows: 9
Columns: 2
$ industry <chr> "Biotechnology", "Diagnostics & Research", "Dru…
$ med_rnd_rev <dbl> 0.48317287, 0.05620271, 0.17451442, 0.06851879,…
9.Create a static bar chart
-use ggplot
to initialize the chart
-data is df
-the variable industry
is mapped to the x-axis -reorder it based the value of med_rnd_rev
-the variable med_rnd_rev
is mapped to the y-axis
-add a bar chart using geom_col
-use scale_y_continuous
to label the y-axis with percent
-use coord_flip()
to flip the coordinates
-use labs
to add title, subtitle and remove x and y-axes
-use theme_ipsum()
from the hrbrthemes package to improve the theme
ggplot(data = df,
mapping = aes(
x = reorder(industry, med_rnd_rev ),
y = med_rnd_rev
)) +
geom_col() +
scale_y_continuous(labels = scales::percent) +
coord_flip() +
labs(
title = "Median R&D expenditures",
subtitle = "by industry as a percent of revenue from 2011 to 2018",
x = NULL, y = NULL) +
theme_ipsum()
ggsave(filename = "preview.png",
path = here::here("_posts", "2021-03-10-joining-data"))
11.Create an interactive bar chart using the package [echarts4r] (https://echarts4r.john-coene.com/index.html)
-start with the data df
-use arrange
to reorder med_rnd_rev
-use e_charts
to initialize a chart -the variable industry
is mapped to the x-axis -add a bar chart using e_bar
with the values of med_rnd_rev
-use e_flip_coords()
to flip the coordinates -use e_title
to add the title and the subtitle -use e_legend
to remove the legends -use e_x_axis
to change format of labels on x-axis to percent -use e_y_axis
to remove labels on y-axis- -use e_theme
to change the theme. Find more themes here
df %>%
arrange(med_rnd_rev) %>%
e_charts(
x = industry
) %>%
e_bar(
serie = med_rnd_rev,
name = "median"
) %>%
e_flip_coords() %>%
e_tooltip() %>%
e_title(
text = "Median industry R&D expenditures",
subtext = "by industry as a percent of revenue from 2011 to 2018",
left = "center") %>%
e_legend(FALSE) %>%
e_x_axis(
formatter = e_axis_formatter("percent", digits = 0)
) %>%
e_y_axis(
show = FALSE
) %>%
e_theme("infographic")